Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGACGACTGCACCATCCACCCAAATTTTGCTGCC
..((((((((((((((((((.&))))..))))))))).................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018107
GeneSymbolRBM23
Binding site9408,9446
Score1.0
Seed1
Au0.529
Energy-20.9
Binding len38
Me-4.957
Phylopstem1.7042004783783788
Phylopflank2.0334792675
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure