Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCCAGCTACCTGAACATTGTGGGCCTGGTT
(((.(((.((((((((......&.)))))))).))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354743
GeneSymbolPFKM
Binding site791,824
Score0.846
Seed0
Au0.485
Energy-18.2
Binding len18
Me-9.283
Phylopstem5.484566
Phylopflank5.464230376249999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure