Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACTCTGTTGGCCAGGC
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018109
GeneSymbolMTPAP
Binding site4951,4970
Score1.0
Seed1
Au0.5
Energy-19.8
Binding len19
Me-9.309
Phylopstem3.1863783333333338
Phylopflank2.8910259221250003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure