Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGCCACCAGAGGACATTTGTGTTAGAAGTAATGGGCCGCCACTGTGG
(((((((((((((((((((((.&))))))))).......)))))........................))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354743
GeneSymbolPFKM
Binding site921,976
Score0.923
Seed1
Au0.471
Energy-24.1
Binding len55
Me-3.938
Phylopstem2.875581981481482
Phylopflank4.2848437875
Longest consecutive pairings9
Position of longest consecutive pairings46
Pairings in 3prime end7
PositionCDS
2D Structure