Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GAGGAGCGGGCGGCCGCGGCTGTGC
..((((((((((((((...((&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018112
GeneSymbolTMEM38B
Binding site18,43
Score1.0
Seed1
Au0.206
Energy-26.0
Binding len20
Me-4.957
Phylopstem0.3487446142857143
Phylopflank-0.4202679832692307
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure