Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCCGCGGCTGCT
..(((((((((((((......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018112
GeneSymbolTMEM38B
Binding site81,95
Score0.923
Seed1
Au0.294
Energy-24.9
Binding len14
Me-5.19
Phylopstem-0.06697397692307695
Phylopflank0.19116633500000008
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure