Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGTTAAGAGATAGCAATGCAACCGCAGCC
.....((((((((((((..((&.))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018115
GeneSymbolSDAD1
Binding site602,635
Score0.885
Seed0
Au0.618
Energy-23.6
Binding len18
Me-13.666
Phylopstem0.39392696083333334
Phylopflank0.0048464956249999955
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure