Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCATGACCAGTTCTGGCCAGGAGCTGGAGG
((.(((((.((((((((((((&))))))))))).................).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354743
GeneSymbolPFKM
Binding site2796,2835
Score0.897
Seed0
Au0.397
Energy-23.8
Binding len39
Me-6.552
Phylopstem0.8230058689655174
Phylopflank1.2306543725
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure