Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAACAGCAGCAGCC
..((.(((((.((((((((..&)))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018116
GeneSymbolMSTO1
Binding site1389,1407
Score0.846
Seed0
Au0.515
Energy-20.2
Binding len18
Me-11.901
Phylopstem0.3227683375
Phylopflank0.9844523574999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure