Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCATACATGCCCAGAGCTGCCTCAGCTGCAT
.((((((((.(((.((..(((&.)))....)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018124
GeneSymbolRFWD3
Binding site1863,1898
Score0.846
Seed1
Au0.426
Energy-22.3
Binding len24
Me-5.893
Phylopstem-0.360427875
Phylopflank-0.16965725999999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure