Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCACAGCAGAATTTCCCTGCCAGAGGCCATGCAGCTGCT
..((((((((((((....(((&.)))...))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018128
GeneSymbolTSR1
Binding site296,338
Score1.0
Seed1
Au0.471
Energy-22.3
Binding len22
Me-5.925
Phylopstem0.02528392857142859
Phylopflank-0.09238473999999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure