Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTACACGCGCGCTGCGGC
(((((((.(((..((((.((.&)).))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018128
GeneSymbolTSR1
Binding site10,30
Score0.923
Seed1
Au0.254
Energy-21.2
Binding len20
Me-10.887
Phylopstem0.9284881000000001
Phylopflank0.02327407458333331
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure