Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCCTTTTTCTTGTACCGTAGGCTGTG
..(((((((((((.(((((((&)))))))............))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018129
GeneSymbolPNPO
Binding site3204,3236
Score0.923
Seed1
Au0.544
Energy-21.0
Binding len32
Me-5.814
Phylopstem-0.03569101666666666
Phylopflank-0.1818579174999999
Longest consecutive pairings7
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure