Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAAAGGCCCAGCTGGGGT
((.((((((.((((((((((.&)))))))...))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018130
GeneSymbolSHQ1
Binding site1331,1354
Score0.846
Seed0
Au0.5
Energy-23.3
Binding len23
Me-6.738
Phylopstem0.933129523076923
Phylopflank0.5861377274999999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure