Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGAATCCGCAGTGCC
..(((.((((((...((((((&))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018130
GeneSymbolSHQ1
Binding site525,544
Score0.923
Seed0
Au0.559
Energy-19.2
Binding len19
Me-9.739
Phylopstem0.6079998333333333
Phylopflank0.08793143999999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure