Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTATTATAGGTTGTATGTTAGAGTA
((((((((((((((.((.....&.)).)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018136
GeneSymbolASPM
Binding site8388,8416
Score0.808
Seed1
Au0.735
Energy-17.3
Binding len20
Me-4.673
Phylopstem4.622782666666668
Phylopflank3.1615428925000004
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure