Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTGGTGAGACCCGCGAGGTTTGTCGTGCGACCGTTGCTGCAGG
(((((((.(((((((((.((.&.)).))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018146
GeneSymbolMRM3
Binding site32,78
Score0.827
Seed1
Au0.353
Energy-25.8
Binding len22
Me-6.251
Phylopstem-0.20141499999999998
Phylopflank-0.11795321047115381
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure