Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCCTAGAAAAAATGACAGATCTCGTAGCTGTT
..((((((((((((((((((.&))))))))))....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018147
GeneSymbolFAIM
Binding site102,141
Score1.0
Seed1
Au0.559
Energy-24.8
Binding len39
Me-4.957
Phylopstem3.0809942192105253
Phylopflank2.4108837041249997
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
Position5UTR
2D Structure