Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACCTGTGCCAGA
..((((((((....((((((((&)))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018151
GeneSymbolRIF1
Binding site5136,5154
Score1.0
Seed1
Au0.647
Energy-18.7
Binding len18
Me-13.275
Phylopstem-0.2289494375
Phylopflank0.80644357375
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure