Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGGGGGCCATCAGCTGCAAT
(((((((((.((((.((((((&))))))..))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018154
GeneSymbolASF1B
Binding site822,846
Score1.0
Seed1
Au0.426
Energy-21.9
Binding len24
Me-5.916
Phylopstem0.17043142
Phylopflank-0.07069271887499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure