Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGGCCGCAGCAGTGCT
..(((((((((((..((((((&)))))).))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018156
GeneSymbolVPS13D
Binding site15279,15300
Score0.846
Seed1
Au0.5
Energy-22.5
Binding len21
Me-6.549
Phylopstem-0.17490996923076924
Phylopflank-0.34447923
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure