Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCAGGACCAGAATAAAGCCTTGGAAGGGCAGCTGCC
..((((((((..((.((((((&.)))))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018168
GeneSymbolCCDC198
Binding site288,327
Score1.0
Seed1
Au0.529
Energy-25.2
Binding len21
Me-11.864
Phylopstem0.0474909375
Phylopflank-0.1866624125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure