Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGCGGCTGCAGCA
.....(((((((((((.((((&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018173
GeneSymbolPLEKHG6
Binding site1336,1353
Score0.846
Seed0
Au0.338
Energy-21.6
Binding len17
Me-13.666
Phylopstem1.2642573636363637
Phylopflank2.7635154875000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure