Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACTCGGGCCCAGCTGCAGA
(((((((((.((((....(((&)))......))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018173
GeneSymbolPLEKHG6
Binding site2543,2566
Score0.846
Seed1
Au0.338
Energy-20.9
Binding len23
Me-6.149
Phylopstem2.052954222222222
Phylopflank0.615713125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure