Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCAACCGGATAGTCCCAGAAGCATCTCAAGTGAGAACAGCAGCAAA
((((.(((((((((((.(((.&)))...))))))).............................)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018181
GeneSymbolZNF532
Binding site1435,1487
Score0.923
Seed0
Au0.426
Energy-19.0
Binding len52
Me-8.057
Phylopstem3.8321802649999994
Phylopflank3.0528419925
Longest consecutive pairings7
Position of longest consecutive pairings39
Pairings in 3prime end6
PositionCDS
2D Structure