Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAACCGCAGCCTGTAC
.(((((((((((((.(.....&).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018188
GeneSymbolATAD3A
Binding site1269,1286
Score0.923
Seed1
Au0.471
Energy-20.7
Binding len17
Me-4.529
Phylopstem3.7273781428571433
Phylopflank4.51124586625
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure