Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGACTGTACAAAGGCTGCT
..((((((((((((..((((.&))))..)))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018193
GeneSymbolFANCI
Binding site1549,1573
Score0.923
Seed1
Au0.5
Energy-19.9
Binding len24
Me-5.925
Phylopstem3.5821017294117645
Phylopflank4.21361906625
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure