Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAATAGTGAATTTGAGAACGGCTGCC
..(((((((..((((((((((&))))))))))..............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018193
GeneSymbolFANCI
Binding site3105,3137
Score0.846
Seed1
Au0.559
Energy-18.5
Binding len32
Me-9.024
Phylopstem3.2035472999999994
Phylopflank4.2270218005
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure