Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCATAGCAGCAGCCTCAGCAGCTGTC
..((((((((((((((.....&.))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018194
GeneSymbolHHAT
Binding site3174,3204
Score0.885
Seed1
Au0.426
Energy-21.9
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure