Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAGGCCGTAGCC
.....(((((((((....(((&)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018195
GeneSymbolNKAPD1
Binding site237,253
Score0.846
Seed0
Au0.412
Energy-18.2
Binding len16
Me-14.634
Phylopstem0.011455222222222219
Phylopflank0.2946702790000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure