Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCCCGGGCTTCCCGTGCGCCTCTGCCGCAGGTGCT
..(((.(((((((....((((&.))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018198
GeneSymbolDNAJC11
Binding site3079,3121
Score1.0
Seed0
Au0.338
Energy-23.5
Binding len19
Me-8.683
Phylopstem5.260044857142857
Phylopflank4.2863047100000005
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure