Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGATGCTGACATCTGCTGCTGCAGA
(((((((.((((.(((..(((&.))).))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018200
GeneSymbolHMG20A
Binding site1572,1601
Score1.0
Seed1
Au0.559
Energy-21.6
Binding len22
Me-7.54
Phylopstem0.4452839142857143
Phylopflank1.2811869753750003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure