Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGCGTTTGCTGCTGCAT
.((((((.((((.((((((((&))).))))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018202
GeneSymbolMACO1
Binding site1672,1694
Score0.846
Seed1
Au0.412
Energy-19.7
Binding len22
Me-7.396
Phylopstem5.145219966666667
Phylopflank5.217235304999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure