Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTGGACCGCCTTGCCCCGGCTGCC
..(((((((.((..(((((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018203
GeneSymbolKLHDC8A
Binding site748,776
Score0.846
Seed1
Au0.191
Energy-23.3
Binding len18
Me-8.345
Phylopstem-0.2727244285714286
Phylopflank0.017389687499999994
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure