Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGACCTGCAGCTGCC
..((((((((((((.(..(((&)))..).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018204
GeneSymbolCKAP2
Binding site96,117
Score0.846
Seed1
Au0.309
Energy-24.8
Binding len21
Me-5.692
Phylopstem0.8975963615384615
Phylopflank0.39797278
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure