Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATGGGGAAGTTCTGCAGAGGGTTG
.((((((((((.((((((.((&))...))))))..)))))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018206
GeneSymbolVPS35
Binding site4659,4685
Score0.846
Seed1
Au0.544
Energy-23.1
Binding len26
Me-7.14
Phylopstem4.183282000000001
Phylopflank5.577775816250003
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure