Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATCAGGGCCGAGCTGTGAG
((((((((.(((((...((((&))))......))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018206
GeneSymbolVPS35
Binding site2033,2057
Score0.923
Seed1
Au0.485
Energy-20.2
Binding len24
Me-5.962
Phylopstem0.16267123749999995
Phylopflank-0.11985419087499993
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure