Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCTACAAGTGCAGCTT
....(((((((.((((((((.&)))...))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018206
GeneSymbolVPS35
Binding site2182,2202
Score1.0
Seed0
Au0.618
Energy-19.5
Binding len20
Me-12.893
Phylopstem-0.40363751818181814
Phylopflank-0.007850760849999989
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure