Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAGCGCTGCAGCTGCT
..(((((((((((..(..(((&)))..)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018207
GeneSymbolTRIM62
Binding site1070,1090
Score0.923
Seed1
Au0.397
Energy-24.7
Binding len20
Me-6.549
Phylopstem-0.48489460909090903
Phylopflank0.054132324999999926
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure