Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGTAGCCGGAGCCAGCGACTGGGAAACGGCTGCAT
.(((((((((((((((..(((&.))).))))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018215
GeneSymbolPNMA8A
Binding site137,177
Score0.846
Seed1
Au0.309
Energy-22.3
Binding len26
Me-3.793
Phylopstem-0.317562885
Phylopflank-0.20709605375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure