Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCATGCCGTTGCTCCGCTGTGGGAGGTGTGTGGGGTCA
.(((((((((..((((((((.&.))))))))..))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018218
GeneSymbolUSP40
Binding site4164,4203
Score0.846
Seed1
Au0.368
Energy-31.7
Binding len21
Me-9.965
Phylopstem3.906031111111111
Phylopflank4.743373652499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure