Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGA
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018219
GeneSymbolCCDC87
Binding site1991,2001
Score1.0
Seed1
Au0.515
Energy-15.7
Binding len10
Me-13.079
Phylopstem-0.0342111111111111
Phylopflank-0.07084476749999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure