Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGTCACCCAGCTGCAGG
(((((((((.((.((...(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018219
GeneSymbolCCDC87
Binding site1203,1223
Score1.0
Seed1
Au0.368
Energy-21.0
Binding len20
Me-6.702
Phylopstem1.6599198888888889
Phylopflank0.009673191250000102
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure