Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCACTGTGCTCTCCCACAAGTCCAGCTGCAAC
((((((((((((.(((((((.&))))))))))................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018222
GeneSymbolPARVA
Binding site1287,1323
Score0.923
Seed1
Au0.515
Energy-20.8
Binding len36
Me-5.227
Phylopstem0.30024579642857147
Phylopflank0.05638341125000004
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end7
Position3UTR
2D Structure