Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCAGA
((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018224
GeneSymbolCOA1
Binding site288,299
Score0.846
Seed1
Au0.426
Energy-19.2
Binding len11
Me-13.224
Phylopstem-0.8341452606
Phylopflank-0.19196372757499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure