Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACCACAGGGGCTGCAAC
((((((((.(((((((.((((&))))))))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018226
GeneSymbolRNPEPL1
Binding site5044,5068
Score0.846
Seed1
Au0.426
Energy-25.8
Binding len24
Me-4.994
Phylopstem0.013374737499999984
Phylopflank-0.513932785
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure