Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGGACCAGGCAGCTGCC
..((((((((((((...((((&))))...))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018226
GeneSymbolRNPEPL1
Binding site1731,1753
Score0.846
Seed1
Au0.368
Energy-24.0
Binding len22
Me-5.925
Phylopstem1.9396877214285717
Phylopflank3.43499925375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure