Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCATCCGCTGGCTGCAGA
((((((((((((.(((..((.&))))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018226
GeneSymbolRNPEPL1
Binding site1905,1925
Score0.904
Seed1
Au0.441
Energy-23.1
Binding len20
Me-5.227
Phylopstem5.203456923076923
Phylopflank3.01350199875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure