Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCTAGGA
.(((((((((((..........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018227
GeneSymbolUBA6
Binding site7629,7641
Score0.923
Seed1
Au0.676
Energy-18.0
Binding len12
Me-6.908
Phylopstem6.547781636363637
Phylopflank5.412546857500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure