Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATCAACCAGCTGTAT
.(((((((..(((((((((((&)))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018227
GeneSymbolUBA6
Binding site4582,4602
Score0.872
Seed1
Au0.706
Energy-19.6
Binding len20
Me-6.092
Phylopstem0.24515191666666666
Phylopflank0.28207098975
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure